Ahrné, Erik: search on Z-Library

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1

The quantitative and condition-dependent Escherichia coli proteome

Schmidt, Alexander, Kochanowski, Karl, Vedelaar, Silke, Ahrné, Erik, Volkmer, Benjamin, Callipo, Luciano, Knoops, Kèvin, Bauer, Manuel, Aebersold, Ruedi, Heinemann, Matthias

Journal:

Nature Biotechnology

Year:

2015

Language:

english

File:

PDF, 1.51 MB

english, 2015

2

Large-Scale Quantitative Assessment of Different In-Solution Protein Digestion Protocols Reveals Superior Cleavage Efficiency of Tandem Lys-C/Trypsin Proteolysis over Trypsin Digestion

Glatter, Timo, Ludwig, Christina, Ahrné, Erik, Aebersold, Ruedi, Heck, Albert J. R., Schmidt, Alexander

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.83 MB

english, 2012

3

Butterflies in semi-natural pastures and power-line corridors - effects of flower richness, management, and structural vegetation characteristics

Berg, Åke, Ahrné, Karin, Öckinger, Erik, Svensson, Roger, Wissman, Jörgen, Stewart, Alan, Bezemer, Martijn

Journal:

Insect Conservation and Diversity

Year:

2013

Language:

english

File:

PDF, 292 KB

english, 2013

4

Classes in the United States and Sweden: A Comparison

Göran Ahrne and Erik Olin Wright

Journal:

Acta Sociologica

Year:

1983

Language:

english

File:

PDF, 1.16 MB

english, 1983

5

Global ion suppression limits the potential of mass spectrometry based phosphoproteomics

Dreier, Roland Felix, Ahrné, Erik, Broz, Petr, Schmidt, Alexander

Journal:

Journal of Proteome Research

Year:

2018

Language:

english

File:

PDF, 7.46 MB

english, 2018

6

Casein micelles in milk as sticky spheres

Smith, Gregory N, Brok, Erik, Christiansen, Morten Vormsborg, Ahrne, Lilia

Journal:

Year:

2020

File:

PDF, 2.18 MB

2020

7

A simple workflow to increase MS2 identification rate by subsequent spectral library search

Erik Ahrné, Alexandre Masselot, Pierre-Alain Binz, Markus Müller, Frederique Lisacek

Journal:

Year:

2009

Language:

english

File:

PDF, 289 KB

english, 2009

8

Unrestricted identification of modified proteins using MS/MS

Erik Ahrné, Markus Müller, Frederique Lisacek

Journal:

Year:

2010

Language:

english

File:

PDF, 435 KB

english, 2010

9

An improved method for the construction of decoy peptide MS/MS spectra suitable for the accurate estimation of false discovery rates

Erik Ahrné, Yuki Ohta, Frederic Nikitin, Alexander Scherl, Frederique Lisacek, Markus Müller

Journal:

Year:

2011

Language:

english

File:

PDF, 377 KB

english, 2011

10

Patterns and scale relations among urbanization measures in Stockholm, Sweden

Erik Andersson, Karin Ahrné, Markku Pyykönen, Thomas Elmqvist

Journal:

Landscape Ecology

Year:

2009

Language:

english

File:

PDF, 368 KB

english, 2009

11

Butterfly distribution and abundance is affected by variation in the Swedish forest-farmland landscape

Åke Berg, Karin Ahrné, Erik Öckinger, Roger Svensson, Bo Söderström

Journal:

Biological Conservation

Year:

2011

Language:

english

File:

PDF, 526 KB

english, 2011

12

Critical assessment of proteome-wide label-free absolute abundance estimation strategies

Ahrné, Erik, Molzahn, Lars, Glatter, Timo, Schmidt, Alexander

Journal:

Year:

2013

Language:

english

File:

PDF, 1.18 MB

english, 2013

13

QuickMod: A Tool for Open Modification Spectrum Library Searches

Ahrné, Erik, Nikitin, Frederic, Lisacek, Frederique, Müller, Markus

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 1.61 MB

english, 2011

14

Targeted Combinatorial Alternative Splicing Generates Brain Region-Specific Repertoires of Neurexins

Schreiner, Dietmar, Nguyen, Thi-Minh, Russo, Giancarlo, Heber, Steffen, Patrignani, Andrea, Ahrné, Erik, Scheiffele, Peter

Journal:

Year:

2014

Language:

english

File:

PDF, 3.10 MB

english, 2014

15

Evaluation of Data-Dependent and -Independent Mass Spectrometric Workflows for Sensitive Quantification of Proteins and Phosphorylation Sites

Bauer, Manuel, Ahrné, Erik, Baron, Anna P., Glatter, Timo, Fava, Luca L., Santamaria, Anna, Nigg, Erich A., Schmidt, Alexander

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 1.70 MB

english, 2014

16

A mammalian transcription factor-specific peptide repository for targeted proteomics

Simicevic, Jovan, Moniatte, Marc, Hamelin, Romain, Ahrné, Erik, Deplancke, Bart

Journal:

Year:

2015

Language:

english

File:

PDF, 345 KB

english, 2015

17

Exploiting the multiplexing capabilities of tandem mass tags for high-throughput estimation of cellular protein abundances by mass spectrometry

Ahrné, Erik, Martinez-Segura, Amalia, Syed, Afzal Pasha, Vina-Vilaseca, Arnau, Gruber, Andreas J., Marguerat, Samuel, Schmidt, Alexander

Journal:

Year:

2015

Language:

english

File:

PDF, 1.83 MB

english, 2015

18

Correction to “Comparison of Different Sample Preparation Protocols Reveals Lysis Buffer-Specific Extraction Biases in Gram-Negative Bacteria and Human Cells”

Glatter, Timo, Ahrné, Erik, Schmidt, Alexander

Journal:

Journal of Proteome Research

Year:

2016

Language:

english

File:

PDF, 440 KB

english, 2016

19

Assessment of current mass spectrometric workflows for the quantification of low abundant proteins and phosphorylation sites

Bauer, Manuel, Ahrné, Erik, Baron, Anna P., Glatter, Timo, Fava, Luca L., Santamaria, Anna, Nigg, Erich A., Schmidt, Alexander

Journal:

Year:

2015

Language:

english

File:

PDF, 472 KB

english, 2015

20

Evaluation and improvement of quantification accuracy in isobaric mass tag based protein quantification experiments

Ahrné, Erik, Glatter, Timo, Viganò, Cristina, von Schubert, Conrad, Nigg, Erich A., Schmidt, Alexander

Journal:

Journal of Proteome Research

Year:

2016

Language:

english

File:

PDF, 2.07 MB

english, 2016

21

Capture Compound Mass Spectrometry - A Powerful Tool to Identify Novel c-di-GMP Effector Proteins

Laventie, Benoît-Joseph, Nesper, Jutta, Ahrné, Erik, Glatter, Timo, Schmidt, Alexander, Jenal, Urs

Journal:

Journal of Visualized Experiments

Year:

2015

Language:

english

File:

PDF, 523 KB

english, 2015

22

Quantitative proteomic and phospho-proteomic comparison of human colon cancer DLD-1 cells differing in ploidy and chromosome stability

Viganó, Cristina, von Schubert, Conrad, Ahrné, Erik, Schmidt, Alexander, Lorber, Thomas, Bubendorf, Lukas, De Vetter, Judith R.F., Zaman, Guido J.R., Storchova, Zuzana, Nigg, Erich A., Barr, Francis A

Journal:

Molecular Biology of the Cell

Year:

2018

Language:

english

File:

PDF, 4.23 MB

english, 2018

23

Deuterium induces a distinctive Escherichia coli proteome that correlates with the reduction in growth rate

Opitz, Christian, Ahrné, Erik, Goldie, Kenneth N., Schmidt, Alexander, Grzesiek, Stephan

Journal:

Journal of Biological Chemistry

Year:

2018

Language:

english

File:

PDF, 3.02 MB

english, 2018